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Thread: Ontology and annotation of gene network in Cytoscape

  1. #1 Ontology and annotation of gene network in Cytoscape 
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    Dear scientists!
    Iīm remaking my old thesis to the article. Itīs comparison of gene expression networks of isoprenoids pathway between the autotrophic and heterotrophic tissue, in Arabidopsis. However, I have a problem with setting a GO and annotation in Cytoscape. When I follow instructions, software 2.8.2 do nothing and 3.1 write:" The table not found". Nodes are named by AGI ID. Have someone had an experience with it?


    And the other question, which method would be the best for compare 2 networks.
    Thank you


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